hopsy.ReversibleJumpProposal#

class hopsy.ReversibleJumpProposal#

This is the implementation of the algorithm described in https://pubmed.ncbi.nlm.nih.gov/31214716/.

Attributes

`activation_probability`
`deactivation_probability`
`has_log_density`	Returns whether the proposal knows about the log density or not.
`has_negative_log_likelihood`	deprecated:: 1.4 Use `has_log_density` instead.
`log_acceptance_probability`
`model_jump_probability`
`name`
`proposal`
`proposal_log_density`	Returns the log density of the proposal.
`proposal_negative_log_likelihood`	deprecated:: 1.4 Use -`proposal_log_density` instead.
`state`
`state_log_density`	Returns the log density of the current state of the proposal.
`state_negative_log_likelihood`	deprecated:: 1.4 Use -`state_log_density` instead.

Methods