hopsy.ReversibleJumpProposal#
- class hopsy.ReversibleJumpProposal#
This is the implementation of the algorithm described in https://pubmed.ncbi.nlm.nih.gov/31214716/.
Attributes
activation_probability
deactivation_probability
has_log_density
Returns whether the proposal knows about the log density or not.
has_negative_log_likelihood
deprecated:: 1.4 Use
has_log_density
instead.log_acceptance_probability
model_jump_probability
name
proposal
proposal_log_density
Returns the log density of the proposal.
proposal_negative_log_likelihood
deprecated:: 1.4 Use -
proposal_log_density
instead.state
state_log_density
Returns the log density of the current state of the proposal.
state_negative_log_likelihood
deprecated:: 1.4 Use -
state_log_density
instead.Methods