SbmlModel.hpp

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#ifndef HOPS_SBMLMODEL_HPP
#define HOPS_SBMLMODEL_HPP
 
#include <string>
#include <vector>
 
namespace hops {
    template<typename MatrixType, typename VectorType>
    class SbmlModel {
    public:
 
        MatrixType getConstraintMatrix() const {
            return constraintMatrix;
        }
 
        void setConstraintMatrix(MatrixType newConstraintMatrix) {
            SbmlModel::constraintMatrix = newConstraintMatrix;
        }
 
        VectorType getConstraintVector() const {
            return constraintVector;
        }
 
        void setConstraintVector(VectorType newConstraintVector) {
            SbmlModel::constraintVector = newConstraintVector;
        }
 
        VectorType getLowerBounds() const {
            return lowerBounds;
        }
 
        void setLowerBounds(VectorType newLowerBounds) {
            SbmlModel::lowerBounds = newLowerBounds;
        }
 
        VectorType getUpperBounds() const {
            return upperBounds;
        }
 
        void setUpperBounds(VectorType newUpperBounds) {
            SbmlModel::upperBounds = newUpperBounds;
        }
 
        [[nodiscard]] const std::vector<std::string> &getParameterNames() const {
            return parameterNames;
        }
 
        void setParameterNames(const std::vector<std::string> &newParameterNames) {
            SbmlModel::parameterNames = newParameterNames;
        }
 
        MatrixType getStoichiometry() const {
            return stoichiometry;
        }
 
        void setStoichiometry(MatrixType stoichiometry) {
            SbmlModel::stoichiometry = stoichiometry;
        }
 
 
    private:
        MatrixType stoichiometry;
        MatrixType constraintMatrix;
        VectorType constraintVector;
        VectorType lowerBounds;
        VectorType upperBounds;
        std::vector<std::string> parameterNames;
    };
}
#endif //HOPS_SBMLMODEL_HPP