File List

Here is a list of all files with brief descriptions:

AcceptanceRateRecorder.hpp
AcceptanceRateTuner.cpp
AcceptanceRateTuner.hpp
AdaptiveMetropolisProposal.hpp
Autocorrelation.hpp
BallWalkProposal.hpp
BinarySearchAcceptanceRateTuner.cpp
BinarySearchAcceptanceRateTuner.hpp
boost_multi_array_2D.cpp
boost_multiarray_complex.cpp
boost_ublas_double.cpp
ChainData.hpp
ChordStepDistributions.hpp
Coldness.hpp
CoordinateHitAndRunProposal.hpp
Covariance.hpp
create_attribute_string_integer.cpp
create_dataset_double.cpp
create_datatype.cpp
create_extensible_dataset.cpp
CSmMALAProposal.hpp
CsvReader.cpp
CsvReader.hpp
CsvWriter.cpp
CsvWriter.hpp
CsvWriterImpl.cpp
CsvWriterImpl.hpp
Data.hpp
DegenerateMultivariateGaussian.hpp
DikinEllipsoidCalculator.hpp
DikinProposal.hpp
DNest4Adapter.hpp
DNest4EnvironmentSingleton.hpp
easy_attribute.cpp
easy_dumpoptions.cpp
easy_load_dump.cpp
EffectiveSampleSize.hpp
Exceptions.hpp
ExpectedSquaredJumpDistance.hpp
ExpectedSquaredJumpDistanceTuner.cpp
ExpectedSquaredJumpDistanceTuner.hpp
FileWriter.hpp
FileWriterFactory.cpp
FileWriterFactory.hpp
FileWriterType.hpp
GammaModels.hpp
GaussianProcess.hpp
GaussianProposal.hpp
GurobiEnvironmentSingleton.cpp
GurobiEnvironmentSingleton.hpp
H5_definitions.hpp
H5Annotate_traits.hpp
H5Annotate_traits_misc.hpp
H5Attribute.hpp
H5Attribute_misc.hpp
H5Converter_misc.hpp
H5ConverterEigen_misc.hpp
H5DataSet.hpp
H5DataSet_misc.hpp
H5DataSpace.hpp
H5Dataspace_misc.hpp
H5DataType.hpp
H5DataType_misc.hpp
H5Easy.hpp
H5Easy_Eigen.hpp
H5Easy_misc.hpp
H5Easy_opencv.hpp
H5Easy_public.hpp
H5Easy_scalar.hpp
H5Easy_vector.hpp
H5Easy_xtensor.hpp
H5Exception.hpp
H5Exception_misc.hpp
H5File.hpp
H5File_misc.hpp
H5FileDriver.hpp
H5FileDriver_misc.hpp
H5Group.hpp
H5Iterables_misc.hpp
H5Node_traits.hpp
H5Node_traits_misc.hpp
H5Object.hpp
H5Object_misc.hpp
H5PropertyList.hpp
H5PropertyList_misc.hpp
H5ReadWrite_misc.hpp
H5Reference.hpp
H5Reference_misc.hpp
H5Selection.hpp
H5Selection_misc.hpp
H5Slice_traits.hpp
H5Slice_traits_misc.hpp
H5Utility.hpp
H5Utils.hpp
Hdf5Reader.cpp
Hdf5Reader.hpp
Hdf5Writer.cpp
Hdf5Writer.hpp
HitAndRunProposal.hpp
hops.hpp
IsAcceptProposalAvailable.hpp
IsAddMessageAvailabe.hpp
IsCalculateLogAcceptanceProbabilityAvailable.hpp
IsClearRecordsAvailable.hpp
IsConstantChain.hpp
IsGetColdnessAvailable.hpp
IsGetExchangeAttemptProbabilityAvailable.hpp
IsGetStepSizeAvailable.hpp
IsInstallDataObjectAvailable.hpp
IsResetAcceptanceRateAvailable.hpp
IsSetColdnessAvailable.hpp
IsSetExchangeAttemptProbabilityAvailable.hpp
IsSetFisherWeightAvailable.hpp
IsSetStepSizeAvailable.hpp
IsStoreRecordAvailable.hpp
IsWriteRecordsToFileAvailable.hpp
LinearProgram.cpp
LinearProgram.hpp
LinearProgramClpImpl.cpp
LinearProgramClpImpl.hpp
LinearProgramFactory.hpp
LinearProgramGurobiImpl.cpp
LinearProgramGurobiImpl.hpp
LinearProgramSolution.hpp
LinearProgramStatus.hpp
MarkovChain.hpp
MarkovChainAdapter.hpp
MarkovChainAttribute.hpp
MarkovChainFactory.hpp
MarkovChainType.hpp
MatrixType.hpp
MaximumVolumeEllipsoid.cpp
MaximumVolumeEllipsoid.hpp
MessageRecorder.hpp
MetropolisHastingsFilter.hpp
Mixture.hpp
Model.hpp
ModelMixin.hpp
ModelWrapper.hpp
MpiInitializerFinalizer.hpp
MultivariateGaussian.hpp
NegativeLogLikelihoodRecorder.hpp
NoOpDrawAdapter.hpp
NormalizePolytope.hpp
otherton.cpp
parallel_hdf5_write_dataset.cpp
ParallelTempering.hpp
pcg_extras.hpp
pcg_random.hpp
pcg_uint128.hpp
PotentialScaleReductionFactor.hpp
Problem.hpp
RandomNumberGenerator.hpp
read_write_dataset_string.cpp
read_write_fixedlen_string.cpp
read_write_single_scalar.cpp
read_write_vector_dataset.cpp
renaming_objects.cpp
ReversibleJumpProposal.hpp
Rosenbrock.hpp
Run.hpp
SbmlModel.hpp
SbmlReader.cpp
SbmlReader.hpp
select_by_id_dataset_cpp11.cpp
select_partial_dataset_cpp11.cpp
SimpleExpectedSquaredJumpDistanceTuner.cpp
SimpleExpectedSquaredJumpDistanceTuner.hpp
simpleton.cpp
simpleton.hpp
SimplexFactory.hpp
SquaredExponentialKernel.hpp
StateRecorder.hpp
StateTransformation.hpp
tests_high_five.hpp
tests_high_five_base.cpp
tests_high_five_easy.cpp
tests_high_five_multi_dims.cpp
tests_high_five_parallel.cpp
tests_import_public_headers.cpp
ThompsonSampling.hpp
TimestampRecorder.hpp
Transformation.hpp
TruncatedNormalDistribution.hpp
UniformBallKernel.hpp
VectorType.hpp
ZeroKernel.hpp